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方超

2024年10月07日 

基本情况:方超,男,博士,副教授。20136月毕业于东北农业大学,获理学学士学位;20196月毕业于中国科学院大学东北地理与农业生态研究所,获理学博士学位。20199月至202112月,在广州大学生命科学学院从事博士后研究。20221月起任广州大学生命科学学院教师。

科研:目前归属于分子遗传与进化创新研究中心,主要从事控制大豆重要农艺性状基因的发掘和调控网络的研究。截止至20249月,以第一作者(含共同第一)或通讯作者(含共同通讯)身份在《Nature genetics》、《Nature Communications》、《Current Biology》、《Molecular Breeding》、《Journal of Integrative Plant Biology》等期刊发表SCI论文25篇。

重要科研项目清单(截止至20249月)

1.大豆长童期性状位点LJ16的图位克隆和功能分析,国家自然科学基金青年基金项目,主持,2021-2023

2.大豆白粉病抗病基因的挖掘及育种应用,国家自然科学基金面上基金项目,主持,2024-2026

3.高产抗逆多倍体大豆种质创制与创新应用,国家重点研发计划青年科学家项目,项目骨干,2022-2027

4.大豆白粉病抗性基因Romd1的克隆与功能解析,广东省自然科学基金面上项目,主持,2023-2026

5.大豆Tof18的基因克隆与功能分析,广州市基础研究计划项目,主持,5万元,2022-2025

近年发表代表性论文(截止至20249月)

1. Subfunctionalization and self-repression of duplicated homologues finetunes soybean flowering and adaptation. Chao Fang*, Zhihui Sun*, Shichen Li*, Tong Su*, Lingshuang Wang*, Lidong Dong*, Haiyang Li, Lanxin Li, Lingping Kong, Zhiquan Yang, Xiaoya Lin, Alibek Zatybekov, Baohui Liu#, Fanjiang Kong#, Sijia Lu#. Subfunctionalization and self-repression of duplicated homologues finetunes soybean flowering and adaptation. Nature Communications . 2024. https://doi.org/10.1038/ s41467 -024-50623-3.

2. Soybean hypocotyl elongation is regulated by a MYB33-SWEET11/21-GA2ox8c module involving long-distance sucrose transport. Tong Su*, Huan Liu*, Yichun Wu*, Jianhao Wang*, Fanglei He*, Haiyang Li, Shichen Li, Lingshuang Wang, Lanxin Li, Jie Cao, Qiulian Lu, Xiaohui Zhao, Hongtao Xiang, Chun Lin, Sijia Lu#, Baohui Liu#, Fanjiang Kong#, Chao Fang#. Plant Biotechnology Journal. 2024. https://doi.org/ 10.1111/pbi.14409. 

3. SoyMD: a platform combining multi-omics data with various tools for soybean research and breeding. Zhiquan Yang*, Chengfang Luo*, Xinxin Pei*, Shengbo Wang,* Yiming Huang*, Jiawei Li*, Baohui Liu, Fanjiang Kong, Qing-Yong Yang#, Chao Fang#.  Nucleic Acids Research. 2024. DOI: 10.1093/nar/gkad786.

4. Two soybean homologues of TERMINAL FLOWER 1control flowering time under long day conditions. Lingshuang Wang*, Chun Lin*, Bohui Li*, Tong Su, Shichen Li, Haiyang Li, Fanglei He, Chuanjie Gou, Zheng Chen, Yanan Wang, Jun Qin, Baohui Liu, Fanjiang Kong, Lin Yue#, Sijia Lu#, Chao Fang#. Crop Journal. 2023. 3, 704-712.

5. A recent retrotransposon insertion of J caused E6 locus facilitating soybean adaptation  into low latitude. Chao Fang*, Jun Liu*, Ting Zhang*, Tong Su, Shichen Li, Qun Cheng, Lingping Kong, Xiaoming Li, Tiantian Bu, Haiyang Li, Lidong Dong, Sijia Lu#, Fanjiang Kong#, Baohui Liu#. Journal of Integrative Plant Biology. 2021, 63, 995. 

6. Mechanisms underlying key agronomic traits and implications for molecular breeding in soybean. Chao Fang*, Haiping Du*, Lingshuang Wang*, Baohui Liu, Fanjiang Kong#. Journal of Genetics and Genomics. 20234. DOI:10.1016/j.jgg.2023.09.004.

7. The genetic basis of high-latitude adaptation in wild soybean. Lidong Dong#,*, Shichen Li*, Lingshuang Wang*, Tong Su*, Chunbao Zhang, Yingdong Bi, Yongcai Lai, Lingping Kong, Fan Wang, Xinxin Pei, Haiyang Li, Zhihong Hou, Haiping Du, Hao Du, Tai Li, Qun Cheng#, Chao Fang#, Fanjiang Kong#, Baohui Liu#. Current Biology . 2023. 33:252-262.e4.

8. Genetic basis and adaptation trajectory of soybean from its temperate origin to tropics. Lidong Dong*, Chao Fang*, Qun Cheng*, Tong Su*, Lingping Kong*, Chunbao Zhang, Haiyang Li, Zhihong Hou, Yuhang Zhang, Lingshuang Wang, Yongli Li, Zhuoran Gan, Xiaohui Yuan, Sijia Lu#, Fanjiang Kong#, Baohui Liu#. Nature Communications . 2021. 12, 5445. 

9. Overcoming the genetic compensation response of soybean florigens to improve adaption and yield at low latitudes. Xiaoming Li*, Chao Fang*, Yongqing Yang*, Tianxiao Lv*, Tong S*, Liyu Chen, Haiyang Nan, Shichen Li, Xiaohui Zhao, Sijia Lu, Lidong Dong, Qun Cheng, Yang Tang, Meilan Xu, Jun Abe, Xingliang Hou, James L Weller, Fanjiang Kong# , Baohui Liu#. Current Biology, 2021. 31, 3755.

10. SoyDNGP: A Web-Accessible Deep Learning Framework for Genomic Prediction inSoybean Breeding. Pengfei Gao*, Haonan Zhao1*, Zheng Luo, Yifan Lin, Yaling Li, Fanjiang Kong, Chao Fang#Xutong Wang#. Briefings in Bioinformatics. 2023. DOI: 10.1093/bib/bbad349.

11. Genome-Wide Identification and Characterization of the Soybean Snf2 Gene Family and Expression Response to Rhizobia. Wang, Jianhao*,#, Zhihui Sun*, Huan Liu, Lin Yue, Fan Wang, Shuangrong Liu, Bohong Su, Baohui Liu, Fanjiang Kong, Chao Fang#. International Journal of Molecular Sciences. 2023, 24, 7250.

12. Parallel selection of distinct Tof5 alleles drove the adaptation of cultivated and wild soybean to high latitude. Lidong Dong*#, Qun Cheng*, Chao Fang*, Lingping Kong*, Hui Yang*, Zhihong Hou*, Yong Li, Hyaiyang Nan, Yuhang Zhang, Qingshang Chen, Chunbao Zhang, Kun Kou, Tong Su, Lingshuang Wang, Shichen Li, Haiyang Li, Xiaoya Lin, Yang Tang, Xiaohui Zhao, Sijia Lu#, Baohui Liu#, Fanjiang Kong#. Molecular Plant . 2022, 15,308-321 

13. A functionally divergent SOC1 homolog improves soybean yield and latitudinal adaptation. Kun Kou*, Hui Yang*, Haiyang Li*, Chao Fang*, Liyu Chen*, Lin Yue*, Haiyang Nan, Lingping Kong, Xiaoming Li, Fan Wang, Jianhao Wang, Haiping Du, Zhongyi Yang, Yingdong Bi, Yongcai Lai, Lidong Dong, Qun Cheng, Tong Su, Lingshuang Wang, Shichen Li, Zhihong Hou, Sijia Lu, Yuhang Zhang, Zhijun Che, Deyue Yu, Xiaohui Zhao#, Baohui Liu#, Fanjiang Kong#. Current Biology. 2022. 32:1728-1742.

14. Natural variation of FKF1 controls flowering and adaptation during soybean domestication and improvement. Haiyang Li*, Haiping Du*, Milan He*, Jianhao Wang*, Fan Wang, Wenjie Yuan , Zerong Huang, Qun Cheng, Chuanjie Gou, Zheng Chen, Baohui Liu, Fanjiang Kong#, Chao Fang#, Xiaohui Zhao#, Deyue Yu#. New Phytologist. 2023, 238, 1671-1684.

15. Origin, variation, and selection of natural alleles controlling fowering and adaptation in wild and cultivated soybean. Zhihong Hou*, Chao Fang*, Baohui Liu, Hui Yang#, Fanjiang Kong#. Molecular Breeding, 2023, 43, 36.

16. Diverse flowering responses subjecting to ambient high temperature in soybean under short-day conditions. Yang Tang*, Sijia Lu*, Chao Fang*, Huan Liu, Lidong Dong, Haiyang Li, Tong Su, Shichen Li, Lingshuang Wang, Qun Cheng, Baohui Liu, Xiaoya Lin#, Fanjiang Kong#.  Plant Biotechnology Journal. 2023. DOI:10.1111/pbi.13996.

17. Understandings and future challenges in soybean functional genomics and molecular breeding. Haiping Du*, Chao Fang*, Yaru Li, Fangjing Kong#, Baohui Liu#. Journal of Integrative Plant Biology. 2022. DOI: 10.1111/jipb.13433.

18. FT5a interferes with the Dt1-AP1 feedback loop to control flowering time and shoot determinacy in soybean. Lin Yue*, Xiaoming Li*, Chao Fang*, Liyu Chen*, Hui Yang*, Jie Yang, Zhonghiu Chen, Haiyang Nan, Linnan Chen, Yuhang Zhang, Haiyang Li, Xingliang Hou, Zhicheng Dong, James L. Weller, Jun Abe, Baohui Liu, Fanjiang Kong#. Journal of Integrative Plant Biology. 2021, 63, 1004.

19. Stepwise selection on homeologous PRR genes controlling flowering and maturity during soybean domestication. Sijia Lu*  , Lidong Dong* , Chao Fang*  , Shulin Liu * , Lingping Kong* , Qun Cheng*  , Liyu Chen*,Tong Su, Haiyang Nan, Dan Zhang, Lei Zhang, Zhijuan Wang, Yongqing Yang, Deyue Yu, Xiaolei Liu, Qingyong Yang   , Xiaoya Lin, Yang Tang, Xiaohui Zhao, Xinquan Yang, Changen Tian  , Qiguang Xie, Xia Li, Xiaohui Yuan , Zhixi Tian #, Baohui Liu# , James L. Weller#, Fanjiang Kong#. Nature genetics. 2020, 52, 1-9.

20. Natural variation of Dt2 promoter controls plant height and node number in semi-determinant soybeans. Kun Kou*, Tong Su*, Yanping Wang*, Hui Yang, Hao Du, Milan He, Tai Li, Lixin Ma, Chunmei Liao, Cen Yang, Wenqian Shi, Linnan Chen, Yongli Li, Bize Yang, Lingping Kong, Shichen Li, Lingshuang Wang, Xiaohui Zhao, Sijia Lu, Baohui Liu#, Fanjiang Kong#, Chao Fang#. Molecular Breeding. 2021, 41, 6.

21. A flowering time locus dependent on E2 in soybean. Tong Su*, Yanping Wang*, Shichen Li*, Lingshuang Wang, Kun Kou, Lingping Kong, Qun Cheng, Lidong Dong, Baohui Liu , Fanjiang Kong#, Sijia Lu#, Chao Fang#. Molecular breeding. 2021, 41, 35.

22. Rapid Excavating a FLOWERING LOCUS T-Regulator NF-YA Using Genotyping-by-Sequencing. Shichen Li*, Tong Su*, Lingshuang Wang, Kun Kou, Lingping Kong, Fanjiang Kong, Sijia Lu, Baohui Liu, Chao Fang#. Molecular Breeding, 2021,41,8.

23. Natural variation and artificial selection of photoperiodic flowering genes and their applications in crop adaptation. Xiaoya Lin*, Chao Fang*, Baohui Liu, Fanjiang Kong#. aBIOTECH, 2021, https://doi.org/10.1007/s42994-021-00039-0.

24. Identification of major QTLs for flowering and maturity in soybean by genotyping-by-sequencing analysis. Lingshuang Wang*, Chao Fang*, Jun Liu*, Ting Zhang*, Kun Kou, Tong Su, Shichen Li, Liyu Chen, Qun Cheng, Lidong Dong, Fanjiang Kong, Baohui Liu#, Sijia Lu#. Molecular Breeding. 2020, 40:99. 

25. Rapid identification of consistent novel QTLs underlying long-juvenile trait in soybean by multiple genetic populations and genotyping-by-sequencing. Chao Fang*, Liyu Chen*, Haiyang Nan*, Lingping Kong*, Yong Li*, Hanyun Zhang, Haiyang Li, Tingyu Li, Yang Tang, Zhihong Hou, Lidong Dong, Qun Cheng, Xiaoya Lin, Xiaohui Zhao, Xiaohui Yuan, Baohui Liu#, Fanjiang Kong#, Sijia Lu#. Molecular Breeding. 2019, 39, 80. 

联系方式:

  箱:fangchao@gzhu.edu.cn         手机/微信号:18646558298